How Two-Foot Molecular Motors May Walk

 

Kazuhiko Kinosita, Jr.1, M. Yusuf Ali1,2, Kengo Adachi1, Katsuyuki Shiroguchi1, and Hiroyasu Itoh1,3,4

 

1Okazaki Institute for Integrative Bioscience, National Institutes of Natural Sciences, Higashiyama 5-1, Myodaiji, Okazaki 444-8787, Japan.

2Department of Physics, Faculty of Physical Sciences, Shahjalal University of Science and Technology, Sylhet-3114, Bangladesh.

3Tsukuba Research Laboratory, Hamamatsu Photonics KK, and 4CREST gCreation and Application of Soft Nano-Machine, the Hyperfunctional Molecular Machineh Team 13*, Tokodai, Tsukuba 300-2635, Japan.

 

Myosins and kinesins each constitute a large family of linear molecular motors that track along a filamentous rail, myosins along an actin filament and kinesins along a microtubule.  These motors are powered by free energy derived from ATP hydrolysis, and their mechanisms of chemo-mechanical conversion have been under intensive study.  Most of myosins and kinesins have two globular domains that bind to the filamentous rail and that hydrolyze ATP in a rail-dependent manner.  The two domains are usually called eheadsf and are connected via a neck-like structure to a common stalk.  Some of the two-headed motors are processive, in that a single molecule moves along a rail for many ATPase cycles without detaching from the rail.  These processive motors appear to ewalk,f using the two heads alternately in a hand-over-hand fashion, as has recently been demonstrated for myosin V and conventional kinesin.  How, then, do they walk forward even in the presence of a backward load?  For the discussion of walking mechanisms, let us call the heads efeetf and necks elegs.f  So far, researchers working on myosin and kinesin had somewhat different views.  Myosinfs legs are reinforced with light chains and are likely stiff.  A prevailing theory thus states that a landed leg acts as a lever: when a landed ankle is bent forward, the leg leans forward, carrying the body forward.  The lifted leg thus easily finds a forward landing site.  Kinesinfs legs, in contrast, are flexible and unlikely to serve as a stiff lever.  Instead, a lower part of a landed leg docks onto the landed foot such that the upper leg emerges from a forward part of the foot.  This biases the Brownian motion of the lifted foot forward, and the foot lands on a forward site.  The relatively small bias could be efficient, because kinesinfs legs are short and must be fully extended to reach a forward or backward site: of the two sites that are available, only the forward site can be reached after the docking.  Recently, we have shown that myosin VI, hitherto considered to be short-legged, walks with the longest strides known.  There is an indication that the legs are actually long, an upper portion being flexible over a sizable length.  Then, myosin VI walks almost like kinesin, relying on biased diffusion.  In myosin V, too, the lifted foot likely undergoes diffusion.  Thus, myosin and kinesin both appear to walk forward by biasing the diffusion of the lifted foot by an action of the landed ankle, either lever action or docking.  Is it really so?  Such a mechanism, alone, would not work properly when the body is pulled backward, particularly when the legs are flexible.  Yet these motors are known to move forward under a few pN of backward load.  We propose that the ankle action in the lifted foot is equally, or probably more, important: toe up-down in the lifted foot will orient the sole correctly such that landing on a forward site is favored over a backward site even if the body is pulled backward.  The toe up-down mechanism warrants forward motion even if legs are completely flexible.